The dataset combines fluorescent time-lapse sediment profile imaging (f-SPI) and diffusion gradient thin gels (DGT) to examine, in situ, the link between an important benthic ecosystem process (bioturbation) and ecosystem functioning (trace metal cycling) in Loch Creran, Scotland. The dimensions of the fg-SPI faceplate were 15x21.5cm (=322.50cm2), but after subtraction of the area occupied by the two DGT gels (=74cm2) the field of view reduces to 9x21.5cm (=248.5cm2). The camera (Nikcon D100, 2000 x 3000 pixels = 6 megapixels effective resolution = 75x75um per pixel) was set to an exposure of 1/60 f=2.0 and film speed equivalent to ISO 400. For each time-lapse sequence images were taken every 5 minutes for a period of 96h (n=1152 images per deployment). Three time-lapse movies are presented here to accompany Teal et. al. 2012 Biogeosciences. Data produced by Dr Lorna Teal (Institute for Marine Resources and Ecosystem Studies, IJmuiden), Dr Ruth Parker (Centre for Environment, Fisheries and Aquaculture Science), and Dr Martin Solan (National Oceanography Centre, Southampton).

The Marine Environment Monitoring and Assessment National database (MERMAN) is a national database which holds and provides access to data collected under the Clean Safe Seas Environmental Monitoring Programme (CSEMP) formerly the National Marine Monitoring Programme (NMMP). The data collected are the responsibility of the Competent Monitoring Authorities (CMAs) who collect the samples from stations in UK waters using water sampling techniques, trawls, nets or grabs. The CMAs then send the collected samples to accredited laboratories where they are analysed. A weighting is calculated, based on the quality of the analysis. The weighting score incorporates the laboratory accreditation, reference material, inter-laboratory comparisons, detection limits, uncertainties and standard deviations. Where data do not meet a threshold score they are given a status of ‘FAIL’ and although they are stored they are not made available to external users. The MERMAN contaminants and biological effects in sediment data start in 1987 with greater use of the database occurring from 1997 onwards. Data are submitted by the CMAs annually and an annual submission may include updates to legacy data to provide additional data or improve data/metadata. The data held in MERMAN fulfils the UK's mandatory monitoring requirements under the Oslo and Paris Convention (OSPAR) Joint Assessments and Monitoring Programme (JAMP). These data are used in support of European Commission (EC) directives and national assessments, such as Charting Progress 2 and are also supplied to the European Marine Observation and Data Network (EMODNET).

The dataset contains hydrographic and biogeochemical data, including continuous underway measurements of surface temperature, salinity, nutrients, chlorophyll and attenuance, irradiance and bathymetric depth. Underway dissolved oxygen and/or trace metal measurements were also collected on occasion. Hydrographic profiles of temperature, salinity, transmittance, fluorescence, dissolved oxygen (data often of poor quality) and scalar irradiance were undertaken, and associated water samples were routinely analysed for suspended particulate material (SPM), chlorophyll, nutrients and particulate organic carbon/particulate organic nitrogen (POC/PON). In addition, dissolved and particulate trace metals, production, contaminants, dissolved organic carbon/total dissolved nitrogen (DOC/TDN) were determined in some cases. Benthic measurements were also collected, including benthic flux determinations (microcosm experiments), sediment characterisation, pore water chemistry measurements and the quantification of the benthic macrofauna. The coastal oceanographic data set was collected along the east coast of England between Great Yarmouth and Berwick upon Tweed. Data were collected between December 1992 and July 1995 during a series of 17 RRS Challenger cruise legs. Most cruises covered two survey grids: one from Great Yarmouth to the Humber designed around the distribution of the sandbanks and a second simple zig-zag grid from the Humber to Berwick on Tweed. A large number of anchor stations, usually over one or two tidal cycles, were worked in the vicinity of the Humber mouth or the Holderness coast. Each cruise leg returned underway data and conductivity-temperature-depth (CTD) data and water bottle rosette samples from grid nodes. A Lasentech in-situ particle sizer was used to obtain grain size distributions at spot depths for each CTD station on many of the cruise legs. Box and multicorer samples were collected on approximately one third of the cruise legs. The River-Atmosphere-Coast Study (RACS) was the component of the Land Ocean Interaction Study (LOIS) programme looking at processes from the river catchment into the coastal sea. Investigators include representatives of Plymouth University, Southampton University, Liverpool University, University of East Anglia, Newcastle University, Plymouth Marine Laboratory, and the University of Wales, Bangor. All data sets collected during the RACS Challenger cruises are held by the British Oceanographic Data Centre (BODC). All underway and CTD data have been fully calibrated and quality controlled by BODC. The water sample and benthic data sets have been quality controlled by the data originators and submitted to BODC. The data are held in the BODC project database and have been published as part of a fully documented CD-ROM product.

The dataset includes physical and biogeochemical measurements of water properties, meteorological data and biogeochemical measurements of sediment parameters. Temperature, salinity, turbidity, oxygen, nutrients, dissolved organic carbon/total dissolved nitrogen (DOC/TDN), particulate organic carbon/particulate organic nitrogen (POC/PON), contaminants and pH were measured at most of the data collection sites, with additional biogeochemical measurements collected at various locations. Temperature, salinity and nutrients are available for virtually all data collection campaigns. The data were collected in a number of estuaries around the UK between 1993 and 1997. The Humber estuarine data set was collected during a series of 33 campaigns on the EA vessels Sea Vigil and Water Guardian in the Humber, Trent and Ouse systems at approximately monthly intervals between June 1993 and December 1996. The measurements were taken over two or three one-day cruises that covered the estuary from the tidal limits of both Trent and Ouse to Spurn Point. Instrumental and sample data are available from a series of fixed stations that were sampled during every campaign. The Tweed estuarine data set was collected during a series of 13 campaigns using RV Tamaris and a rigid inflatable vessel at approximately monthly intervals between July 1996 and July 1997. Data were collected throughout the tidal reaches of the River Tweed. The dataset forms part of the NERC Land Ocean Interaction Study project. Key investigators for this LOIS sub-project included Plymouth Marine Laboratory. The data are held in the British Oceanographic Data Centre project database.

The Marine Environment Monitoring and Assessment National database (MERMAN) is a national database which holds and provides access to data collected under the Clean Safe Seas Environmental Monitoring Programme (CSEMP) formerly the National Marine Monitoring Programme (NMMP). The data collected are the responsibility of the Competent Monitoring Authorities (CMAs) who collect the samples from stations in UK waters using water sampling techniques, trawls, nets or grabs. The CMAs then send the collected samples to accredited laboratories where they are analysed. A weighting is calculated, based on the quality of the analysis. The weighting score incorporates the laboratory accreditation, reference material, inter-laboratory comparisons, detection limits, uncertainties and standard deviations. Where data do not meet a threshold score they are given a status of ‘FAIL’ and although they are stored they are not made available to external users. The MERMAN dataset starts in 1987 with greater use of the database occurring from 1997 onwards. Data are submitted by the CMAs annually and an annual submission may include updates to legacy data to provide additional data or improve data/metadata. The data held in MERMAN fulfils the UK's mandatory monitoring requirements under the Oslo and Paris Convention (OSPAR) Joint Assessments and Monitoring Programme (JAMP). These data are used in support of European Commission (EC) directives and national assessments, such as Charting Progress 2 and are also supplied to the European Marine Observation and Data Network (EMODNET).

This dataset includes physical, biological and biogeochemical measurements of both the water column and seabed sediments. Hydrographic data include temperature, salinity, attenuance, dissolved oxygen, fluorescence, photosynthetically active radiation (PAR), sound velocity and current velocities, while biogeochemical analyses of water samples provided measurements of nutrients and biological sampling provided measurements of zooplankton abundance. A large number of benthic parameters were measured, including concentrations of substances such as nutrients, metals and carbon in both sediments and sediment pore waters. Benthic fauna were also studied, while rates of sedimentation flux were quantified. These oceanographic and benthic data were supplemented by satellite ocean colour imagery. The data were collected in the North Atlantic Ocean at the Mouth of Rockall Trough, Hatton-Rockall Basin and the Flank of Feni Drift between August 1997 and June 1999 over four cruises, comprising a preliminary site assessment (CD 107 August, 1997) followed by two process cruises (CD 111, April-May 1998, and CD 113, June-July 1998). A further cruise (CH 143) was part-funded by BENBO to retrieve moorings. The data were collected using a variety of instrumentation, including shipboard deployment of conductivity-temperature-depth (CTD) profilers with attached auxiliary sensors, benthic samplers, landers, cameras and incubation chambers, water samplers and continuous underway sensors. These were supplemented by moored sensor and satellite data. The BENBO programme was led by the Scottish Association for Marine Science/Dunstaffnage Marine Laboratory involved researchers from Southampton Oceanography Centre, Scottish Universities Research and Reactor Centre, Plymouth Marine Laboratory, Lancaster University, Leeds University, Edinburgh University, Cambridge University and the University of Wales, Bangor.

The data set comprises a diverse collection of physical, chemical and biological measurements, encompassing well over 1000 parameters. There are data from over 1000 conductivity-temperature-depth (CTD)/rosette stations, over 440 core profiles, over 180 sediment trap samples, over 140 net hauls and much, much more. The primary study area was a box extending to the base of the slope from Vigo to Cap Finistere. However, data are included from both further offshore (filament tracking) and from the Portuguese Margin. Measurements were taken from November 1996 to October 1999 during 33 cruise legs, involving research vessels from seven nations. Data were collected using a variety of equipment and techniques, including expendable bathythermographs (XBTs), turbulence probes, CTDs and oceanographic undulators with auxiliary sensors. These hydrographic profiles were accompanied by net hauls, plankton recorder deployments, sediment cores and a comprehensive water sampling programmes during which a wide variety of chemical and biological parameters were measured. The station data were supplemented by underway measurements of oceanographic and meteorological properties. Results from production and phosphate uptake experiments are also included in the dataset, as are bathymetric data from multibeam (swath) surveys, coastal upwelling measurements and data from moored instruments and benthic landers. The dataset also includes imagery from satellites, seabed photography and X-ray photographs of core samples. The aim of the project was study biogeochemical processes at the shelf break and to quantify the fluxes of material between the shelf and the open ocean. The project brought together over 100 scientists from 40 research centres and universities throughout Europe. The British Oceanographic Data Centre (BODC) is assembling the data sets collected during OMEX II into its project database system and the data set is also available on CD-ROM.

The dataset comprises hydrographic data, including salinity, temperature, depth, dissolved oxygen, transmittance (for suspended sediment), chlorophyll, irradiance, and current velocities. Both oceanographic and benthic measurements of nutrients (nitrate, nitrite, silicate, phosphate and ammonium), phytoplankton and zooplankton abundance, dissolved and particulate trace metals, primary and bacterial production, sulphur compounds and halocarbons were collected, as well as atmospheric physical and chemical measurements. The data were collected in the North Sea between August 1988 and October 1990 over a series of 38 cruises on RRS Challenger. Oceanographic measurements were taken using hydrographic profilers, moored instruments and shipboard underway systems. Underway meteorological data were also collected in addition to a comprehensive atmospheric sampling programme. Both continuous and discrete water samples were collected, providing biogeochemical and biological data. These were supplemented by net hauls. Benthic processes were investigated with sediment cores taken on eight survey cruises at six sites of varied character, three being in the area of summer stratification. Water and benthic sample analyses were supplemented by results of seabed and shipboard incubation experiments. The North Sea Project evolved from a NERC review of shelf seas research, which identified the need for a concerted multidisciplinary study of circulation, transport and production. The Proudman Oceanographic Laboratory (POL), now the National Oceanography Centre (NOC) hosted the project. It involved over 200 scientists and support staff from the Natural Environment Research Council (NERC), the Ministry of Agriculture, Fisheries and Food (MAFF - now DEFRA) and other academic institutes. The data are held at the British Oceanographic Data Centre and are available on CD-ROM.

The data set comprises a diverse collection of physical, chemical and biological measurements, encompassing over 1000 parameters. There are data from over 1650 conductivity-temperature-depth (CTD)/rosette stations, over 300 core profiles, over 370 sediment trap samples and much, much more. Most of this effort was directed at the region of the east Atlantic margin between La Chapelle Bank and the Goban Spur (between France and Ireland). In addition, there were two secondary areas of interest: the Norwegian Shelf Break just off Tromso and the Iberian Margin, either off Vigo or in the vicinity of the Tagus estuary. Measurements were collected from April 1993 until the end of December 1995 during 55 research cruise legs. Data were collected using a variety of equipment and techniques, including expendable bathythermography (XBTs), CTDs and oceanographic undulators with auxiliary sensors. These hydrographic profiles were accompanied by net hauls, plankton recorder deployments, sediment cores and comprehensive water and air sampling programmes during which a wide variety of chemical and biological parameters were measured. The station data were supplemented by underway measurements of oceanographic and meteorological properties. Results from production and trace metal experiments are also included in the dataset, as are bathymetric data from the British Oceanographic Data Centre (BODC) GEBCO digital Atlas, air-sea flux measurements and data from moored instruments and benthic landers that were deployed for periods from a few weeks to a year. The dataset also includes imagery from satellites, water column and seabed photography, scanning electron micrographs and X-ray photographs. FORTRAN source code for biogeochemical models developed during OMEX I is also included. The aim of the project was to study biogeochemical processes at the shelf break and to quantify the fluxes of material between the shelf and the open ocean. OMEX I involved scientists from 30 institutions in 10 countries. BODC is assembling the data sets collected during OMEX I into its database system and the data are also available on CD-ROM.